Insertion junction: CLIP2.028470_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028470
Chromosome:chromosome 7
Location:4877728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346350 (1 of 2) PTHR10174//PTHR10174:SF113 - RETINALDEHYDE BINDING PROTEIN-RELATED // RETINALDEHYDE-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACTCATGATTGATTAAGAAGTGAAGGGGGGGGGCTCAGCCCAAAAA
Internal bar code:GGCTGATAGGGGCACGTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTTTCGTCGCTCGCATG
Suggested primer 2:CACACGAACACACACCGAAC