Insertion junction: CLIP2.028471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028471
Chromosome:chromosome 17
Location:1033402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703400 (1 of 3) PTHR11207//PTHR11207:SF7 - RIBONUCLEASE III // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCACAAGTGGCAGCTGCGTCTGTTGGTGCTGGGGCTGCTCTAGTTGGT
Internal bar code:GTCCTATAAGTTGGATGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3161
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGTACGGCGATCTGAA
Suggested primer 2:AGCGTTCCTTGGGTTTACGT