Insertion junction: CLIP2.028476_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028476
Chromosome:chromosome 2
Location:1439995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCACAGCCCGGTGCGCCGCCCCGCCGCCACCAACGCCAGCTGCAGC
Internal bar code:ACATAGTCACTTTGGCTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTCAAGTCCCCATGCAT
Suggested primer 2:ATTGGCAACGGTCAAAGTGC