Insertion junction: CLIP2.028489_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028489
Chromosome:chromosome 16
Location:704720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691353 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGTCTCCACTTCATCAATCCCAACACATGTTTGCCGCCCGCCCGCG
Internal bar code:TTTGGGCCTGTCTGGAGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2017
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTGTACAGGAGCACAC
Suggested primer 2:CCATCAAGCTGCCTCCAAGA