Insertion junction: CLIP2.028490_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028490
Chromosome:chromosome 13
Location:3589734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588000 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCTGCCACAGCCGGAGAGGGGCAGGCGGTAAAGCGAACCCACCAA
Internal bar code:AACATCGTCGTGCGCCCACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTAAGGAGCCGCACAT
Suggested primer 2:GCATATGCCCAGCCATTTGG