Insertion junction: CLIP2.028495_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028495
Chromosome:chromosome 13
Location:2521224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580050 (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTAACTTCCGCTAGACTTAAAAACACACACAGTGCGCGCCCCTCTCA
Internal bar code:CAAGAGCGGGCAAGATATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1076
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGATGGGCATGTATGA
Suggested primer 2:GTGATGAACCCCGACCACAT