Insertion junction: CLIP2.028502_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028502
Chromosome:chromosome 13
Location:3335345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586350 (1 of 1) PTHR10992//PTHR10992:SF754 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // DNA PHOTOLYASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGCAGGCGGCAAGAGGGAGAGGCAGGACAGAAGGCGAGCCGTTCACA
Internal bar code:ATTAAGCTATTAGGTACAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAGACAGGCATACGCT
Suggested primer 2:CGAGGTCGTATGGGTGTACG