Insertion junction: CLIP2.028504_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028504
Chromosome:chromosome 5
Location:2255280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238000 (1 of 3) IPR006502//IPR011705 - Protein of unknown function PDDEXK-like // BTB/Kelch-associated CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACCCTGACTTTGCTGCCTTCACGGATCTGCGGGCGGAGGCCAAGCGG
Internal bar code:TTTGATACATGGGTGAATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGATGCGTTCGCGTAAAG
Suggested primer 2:CAGCGACGACTTTGCAACAA