Insertion junction: CLIP2.028509_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028509
Chromosome:chromosome 17
Location:1652810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707800 SNRK2J (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGCGATGATTATGATGGGCGCTCGCGCGCAGGGGCACCCAAATGCT
Internal bar code:TCACACTGTCGTCCTAAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2937
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTTCAAGAAGCAGGCC
Suggested primer 2:ATCCCCTGTTGCATCCCTTG