Insertion junction: CLIP2.028509_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028509
Chromosome:chromosome 17
Location:1652812
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707800 SNRK2J (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTCCACAGGAGCACTACCCCACCTTCAACCGCAACTCCGTCAAGGC
Internal bar code:TATGCGGCGAGTCGGCTCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3282
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCCTGTTGCATCCCTTG
Suggested primer 2:AGGAGTTCAAGAAGCAGGCC