Insertion junction: CLIP2.028514_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028514
Chromosome:chromosome 2
Location:3256349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097227 Found in Chlamydomonas and Volvox but not strongly conserved elsewhere CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCTCTACTCGCGCGCGCAGGGCCGGCACGGCGTGCGCACGGACGCCT
Internal bar code:CTCTTGCTATAGCAGCAACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGGACTCACCACCTTGC
Suggested primer 2:ATGAAGTGAAGTGCCGACGT