Insertion junction: CLIP2.028517_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028517
Chromosome:chromosome 7
Location:6259296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g356600 (1 of 1) PF08007 - Cupin superfamily protein (Cupin_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCCCCCGCCTACCGTGAGGCCGTGCTTGTAGATGGCTCCCACGGGC
Internal bar code:GTAGTTTTTTAGTACGGTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:69.7674
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACACACTCTTGCACAC
Suggested primer 2:GAGATGAGGGCGTGAGGAAG