Insertion junction: CLIP2.028530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028530
Chromosome:chromosome 9
Location:1162622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00140371

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCGTCCCATGGTGAATTCACGCATTCCTCGTTGATCAGGTGTCCAAA
Internal bar code:CTGCGCATGCTTTGTATATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:167
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:167

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTATCGCCTGATACCGGC
Suggested primer 2:CTGCCCATTGACTGTCCCAT