Insertion junction: CLIP2.028530_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028530
Chromosome:chromosome 9
Location:1162624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00140371

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGAAATGTGGAACCTCGGGGTTCGACTCTCGCCAAGAGCACTTTTTG
Internal bar code:GGTGGTAAACTGGGTATTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4050
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCATTGACTGTCCCAT
Suggested primer 2:TGTTATCGCCTGATACCGGC