Insertion junction: CLIP2.028534_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028534
Chromosome:chromosome 12
Location:1388708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGTGTTTGCCCCCTTCGGTTAATGGCTGGCCCACATGGCCCTCGATG
Internal bar code:GATCATCTCGGTAATATGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACACATGTTGCCGCTG
Suggested primer 2:GTTGAGAGCTGAGTGGCTGT