Insertion junction: CLIP2.028541_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028541
Chromosome:chromosome 10
Location:1131701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425501 (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGATGATGGCCTCATTCCCAGCAAGCAACAAGAGACACGACGGTCC
Internal bar code:AGGTGGTTCGACAACATGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTCGGTGTTCCTTGAC
Suggested primer 2:GCGCATACAAAACCAAGCCA