Insertion junction: CLIP2.028549_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028549
Chromosome:chromosome 2
Location:5289090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112800 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTCAGAGCCAGGGCTCACAGCAATGGGCTGGTGCCACGGGGGGCAG
Internal bar code:GTTATTATTGTGACTTGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5312
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTTGCTATCCCTCGTC
Suggested primer 2:CCACTCTCCCTCCCTCTCAA