Insertion junction: CLIP2.028558_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028558
Chromosome:chromosome 2
Location:5602581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115450 CYG47 (1 of 5) IPR000104//IPR001054//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACATCTTAGGCTATCTGGGTTTGGCGGGTGTAGCAGTGGGTGCGGGTG
Internal bar code:GTCGCTTATTGCTAGTCTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2289
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTTTCCCAAGGCGATG
Suggested primer 2:GCCTTCCTGAACGGTGTGTA