Insertion junction: CLIP2.028559_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028559
Chromosome:chromosome 2
Location:1627520
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085150 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGATAGCCACAAGGGACCTGCCCGACTGAAAGCAACAGCACTGGATGG
Internal bar code:CGATTGGTAGCTTGGGATAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2180
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCGTGCGCCCGTACTAA
Suggested primer 2:AACACTGTGTCGTCTAGCGG