Insertion junction: CLIP2.028562_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028562
Chromosome:chromosome 16
Location:5734830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCATCCCTTGCTTGGACCTCAAGCCTTCGGCAGTGAACAGGCACAAG
Internal bar code:TTAAATCATGAGTTATTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2485
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGCCGCCAATTCAACA
Suggested primer 2:CCTACTGCTCGTACGCTGAG