Insertion junction: CLIP2.028573_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028573
Chromosome:chromosome 12
Location:9405935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541300 KATL4 katanin like protein 4, similar to the catalytic subunit; (1 of 9) 3.6.4.3 - Microtubule-severing ATPase / Katanin 3'UTR_intron
Cre12.g541350 (1 of 14) PF00566 - Rab-GTPase-TBC domain (RabGAP-TBC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCTGGAGGCATTTGCATTCTACCGCCTGCACGGCGCATCACTTCGCA
Internal bar code:GCCTGGACTCATAGTAACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1826
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCCCCACAAAAGCAA
Suggested primer 2:TCCGCTTATCCATCGAAGCC