Insertion junction: CLIP2.028574_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028574
Chromosome:chromosome 9
Location:5513436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409050 OTU6 (1 of 2) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1); OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGCAAATGAGCCAGGAGGAGAGCGGGGGGAGGAATAGGAGGAGGGA
Internal bar code:GAAGACGAGGGTTCAGGGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGAGGATGAGAACGAGG
Suggested primer 2:GCAGTGTGAAGTTGGCTGTG