Insertion junction: CLIP2.028578_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028578
Chromosome:chromosome 3
Location:458559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144947 (1 of 34) IPR000571 - Zinc finger, CCCH-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCAGCTGTCCCTGACCTCGCAGGTGGTTCCTGGCTCCACCACCTCT
Internal bar code:TTGAATGGGTGTCTGGGCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1745
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTAGCTGCCCGTTAAC
Suggested primer 2:AGCAACAACAGCAACAGCAG