Insertion junction: CLIP2.028578_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028578
Chromosome:chromosome 3
Location:458563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144947 (1 of 34) IPR000571 - Zinc finger, CCCH-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTCAATGCTTGGCGAGCCGGCCGCGCTGGGGTGCTGACGCATCGCCG
Internal bar code:TTGAATGGGTGTCTGGGCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3148
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACAACAGCAACAGCAG
Suggested primer 2:ACCTGTAGCTGCCCGTTAAC