Insertion junction: CLIP2.028583_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028583
Chromosome:chromosome 11
Location:1483491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469224 (1 of 1) IPR010036//IPR023214 - Magnesium-dependent phosphatase-1, eukaryotic/arcaheal type // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTAGTCGCGCCGCCGCCTTTGTCCTGTCAACACCAGCCTCACGGCCTG
Internal bar code:ATAATACTCACGGGTCCAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:388
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCATTTGACTTTGGTGG
Suggested primer 2:GTCGTCGAACAGCATTACGC