Insertion junction: CLIP2.028589_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028589
Chromosome:chromosome 9
Location:962802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402700 (1 of 3) K12041 - solute carrier family 9 (sodium/hydrogen exchanger), member 6/7 (SLC9A6_7, NHE6_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCCCTTCCCCCTGCAGTCTTTAGTGCAGCCTGCACAGCTTTTTCAAA
Internal bar code:CATGCATCTTACTCATTTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGTTGTCGTCACGCAC
Suggested primer 2:TTCCATGAACAGCCATCCCC