Insertion junction: CLIP2.028598_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028598
Chromosome:chromosome 16
Location:7510480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682363 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACATCTGCACTGCACCCGCGGCGCAGGACTTTGAGCACGACCAGAG
Internal bar code:GGAGTTATAGACCTGAGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATTATGGCCTTGACCT
Suggested primer 2:GGGCAACTTTCAGCTTTGGG