Insertion junction: CLIP2.028607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028607
Chromosome:chromosome 13
Location:1643699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573650 SRS8,SRS5 Serine/arginine-rich pre-mRNA splicing factor; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCCCTGTCCTCGTCACGCACCCGCTCCCGTGGACGCTCCTGACTTCC
Internal bar code:TAAAGCGGTACTAGGCCTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTTGCATGTGTGTGT
Suggested primer 2:ACCAAATGTCCCTACCTGCG