Insertion junction: CLIP2.028613_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028613
Chromosome:chromosome 10
Location:3066936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441100 PIGT,GPIT1,GPI16,GIT1,PIGT1 GPI transamidase component Gpi16; (1 of 1) K05292 - phosphatidylinositol glycan, class T (PIGT) 5'UTR
Cre10.g441150 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAGTCACGGACGGCCACTCCCTGGTGCAATACCGCCGGCATCAAGCC
Internal bar code:CTTCGTGTATAACTAGGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5957
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCCAGGGATTTTAATG
Suggested primer 2:ATTGCCGAACGGGTAAGTGT