Insertion junction: CLIP2.028620_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028620
Chromosome:chromosome 9
Location:2770171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTTTAGGCTCACTGCAGGCGCGGGGTGGGTTTACTGCCTTTGGCCC
Internal bar code:GCGGTCTTAGCGGGGTCTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGCCGCGTTTCTTAA
Suggested primer 2:CGTAACATGTAGGCGCTTGC