Insertion junction: CLIP2.028629_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028629
Chromosome:chromosome 2
Location:7681150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147301 (1 of 33) IPR013763 - Cyclin-like intron
lncRNA_TCONS_00136852 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTAGAGCTACCCGTCCTGCACACGTGCGCGCTGCCTGTCCTAGCCCG
Internal bar code:AAATTATAAGGTCTTTGATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2655
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGACAGCTTCACTCCC
Suggested primer 2:AAATGTTGTTTCAGCCCCGC