Insertion junction: CLIP2.028651_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028651
Chromosome:chromosome 2
Location:3360804
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098100 (1 of 1) PTHR14134//PTHR14134:SF3 - E3 UBIQUITIN-PROTEIN LIGASE RAD18 // SUBFAMILY NOT NAMED intron
lncRNA_TCONS_00040973 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGCGGGTGCAGTGGTGGACTAGATGTGCCTTAAGATCTACTGTTCCC
Internal bar code:GTAAAAGTCGATTGGGTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:607
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTAGTTGCCCATGCTGT
Suggested primer 2:TTCTGTGCTGTGCATTTGCC