Insertion junction: CLIP2.028658_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028658
Chromosome:chromosome 7
Location:1351045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322650 CSA1 Chlorophyceae-specific gene family A protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCTACAGGCGGAGGGGGATGGCGCCTGCCGCCTTCGGTCTTGGGCTC
Internal bar code:TAGAGGCACTACGCGGAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2390
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACATGCAGCGAATGAAG
Suggested primer 2:GCTCAGGGCTACGGTATGTC