Insertion junction: CLIP2.028659_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028659
Chromosome:chromosome 9
Location:3786717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397586 (1 of 2) IPR000719//IPR001245//IPR002290//IPR011009//IPR017986//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // WD40-repeat-containing domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTAGAGCGGAGGAGGCAGGGTGCGTGCGCAGGGCTCTTTGACACCCT
Internal bar code:AGTCACGTAGGTCAATTCATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTTCGGCATCATCATG
Suggested primer 2:CACGGCCTTGAACTTGTTGG