Insertion junction: CLIP2.028660_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028660
Chromosome:chromosome 6
Location:2840994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272100 (1 of 1) K15463 - tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-] (RIT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAAGGGTTCGCAGAAACAATTAATGGCCCGCCCATAGGTGCGCTAGAA
Internal bar code:AAAGTTTAAATACTTGGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4144
LEAP-Seq percent confirming:58.6207
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGATCGTCTTCTGCTGT
Suggested primer 2:CGAGTCCTTCGTCACCTCAG