Insertion junction: CLIP2.028665_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028665
Chromosome:chromosome 11
Location:1332776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467706 (1 of 1) PTHR10625//PTHR10625:SF117 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACATTCTTGCCCCCCCCCCGCTCACCCGGGTGCT
Internal bar code:GCATTCGTTCTGCTGATCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCCATGCACACTGCTA
Suggested primer 2:GGATGTCCCAATCCAGCACA