Insertion junction: CLIP2.028675_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028675
Chromosome:chromosome 1
Location:91983
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000600 (1 of 1) PTHR19848//PTHR19848:SF0 - WD40 REPEAT PROTEIN // NOTCHLESS PROTEIN HOMOLOG 1; Predicted WD-4 repeat family protein / notchless protein, putative intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCCCACCCTCAAGCCCCACCCTCAAGCCCCACCTCAAGCCCCGCAA
Internal bar code:CTCAGCACTATTTTAATAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2167
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGAAAGAGGAGGAAACG
Suggested primer 2:CCCCTGCGTACTTACATGGG