Insertion junction: CLIP2.028688_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028688
Chromosome:chromosome 6
Location:5301980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGGCCTGGGCTGTTGGAAGCGCGTAAAATGCATGGCATGGGCACTA
Internal bar code:TTAGTAGCGTTGTGTTTGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCCACAAAGATCCAGAG
Suggested primer 2:CCGCTTAGGGAGGCTTCAAA