Insertion junction: CLIP2.028688_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028688
Chromosome:chromosome 6
Location:5301991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284700 AAT2 Alanine aminotransferase; (1 of 1) K00814 - alanine transaminase (GPT, ALT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCCTCCGGACCGACTGCTCCTGGCGCACCTCCGCGTGTCCTACCTT
Internal bar code:GAGCAGTTGTTATCGGGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTAGGGAGGCTTCAAA
Suggested primer 2:ACGCCCACAAAGATCCAGAG