Insertion junction: CLIP2.028690_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028690
Chromosome:chromosome 17
Location:2558005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716050 (1 of 1) PTHR20953:SF2 - PROTEIN SEEDLING PLASTID DEVELOPMENT 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAGCAGGGGGCAGAGGTTGCGCAGAAGGGCCGAGGTGGAGGTGGCGG
Internal bar code:CCAGATGCTCCGTCTGGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1994
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCTGGATCAGGCGGATG
Suggested primer 2:CAGTTCCTGGGGATAGGGGA