Insertion junction: CLIP2.028696_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028696
Chromosome:chromosome 3
Location:6207696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191350 (1 of 1) K05642 - ATP-binding cassette, subfamily A (ABC1), member 2 (ABCA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGGGCGGGGCACAAACTAATAACGGGCGTGACAGTGCAAGTCTTCA
Internal bar code:GCGCTATGATAGGACGCCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1238
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACACAGCCCGTTTCTCC
Suggested primer 2:TGTGCCGTGTCTAAGTGTCC