Insertion junction: CLIP2.028700_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028700
Chromosome:chromosome 7
Location:1298601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322300 XPD4,RAD3D RAD3/XP-D family DNA-binding helicase; (1 of 1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTTGAGACGGCGGGCAGCAACGGTCAGGGCGGCGTCACAGGCGAAGA
Internal bar code:GGCCGTGCGTCAAAAACTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACGGTAGAAGGTGTGTG
Suggested primer 2:GGCGGAGGATGTGAAGACAA