Insertion junction: CLIP2.028704_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028704
Chromosome:chromosome 2
Location:5824828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800243 CDS
lncRNA_TCONS_00041141 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGACGAGTGCGGGACCGGCTCGAGCGGATGGCTTTCATAGGAAGGTG
Internal bar code:ATTCAGAGGAAAGTATTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCCATAAGTGCACCCAC
Suggested primer 2:GATGACGGATGGCTGCCATA