Insertion junction: CLIP2.028705_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028705
Chromosome:chromosome 12
Location:5577440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531000 AMT1H,AMT8 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCGGACCTGTGCGCGCGAGGTGGTCTGGCGGTGGTGATGCAACAGT
Internal bar code:CTCCCTAGAGGGTCTGTATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGGGAAAGAAGGGCAG
Suggested primer 2:CACGTCAAGCACCAAACAGG