Insertion junction: CLIP2.028717_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028717
Chromosome:chromosome 12
Location:3908702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801398 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGCAGAGGTACCAGGAGAGGACTCGTACTCCAGCTCTAGAACAAGG
Internal bar code:ACTTTTACTACTATTCTTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTCTCAGATGCTGCTC
Suggested primer 2:GGTCAGGGTTAGCAGGCAAT