Insertion junction: CLIP2.028720_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028720
Chromosome:chromosome 10
Location:1011818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424900 PHX13,PFH1 Prolyl 4-hydroxylase 1; (1 of 2) PTHR10869//PTHR10869:SF66 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCAGCGAGCAGGCAGCTGGCAGCGGCGGGGTGTTGCGCTGGGCAGCT
Internal bar code:TTTGTTGGACGGCAATTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATCCCGGCGCATAGGAAAC
Suggested primer 2:AATGGCAGAGGAATGGGGTG