Insertion junction: CLIP2.028730_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028730
Chromosome:chromosome 11
Location:1402377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801257 (1 of 11) PF07173 - Protein of unknown function (DUF1399) (DUF1399) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGAGCATCTGTCCTCCCGGCTGACGGCAACGGCGGCTGTGGCGGCGG
Internal bar code:ACAAGGGCCTCTTTGGTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1216
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCCAAGCCAGGTACAA
Suggested primer 2:ACCAAGCCAGACCAAACCAA