Insertion junction: CLIP2.028739_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028739
Chromosome:chromosome 10
Location:790698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422900 (1 of 10) PTHR23257:SF520 - IP11267P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCTTGTGACGAGCTGCCACAGCAGCATGCCGAAGCTGAACACATCTG
Internal bar code:TGGTTCATATAGTGGACGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2016
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGCACCTCTTCTCATT
Suggested primer 2:TTCACAATGGCCTCGAACGA