Insertion junction: CLIP2.028750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028750
Chromosome:chromosome 7
Location:6135978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCAGCCCCCAGCACCGATGCCCGCAGGTCCGCTGCCCGCGAGGCGCC
Internal bar code:GTGTGGCAGATCCTACTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCGTCATTGTGGGGCAG
Suggested primer 2:AGCTACGCACATCCAAACGA