Insertion junction: CLIP2.028771_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028771
Chromosome:chromosome 9
Location:5381877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408100 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGGGTCTTGGTTTAGTTGAGATTGGATGGACTACCCCAGCCTCAGC
Internal bar code:TTTAAGGCTGCTGTCACCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCTTCACGCAACTGTA
Suggested primer 2:GTGTGTGTGTGTCCATGTGC